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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015849519.1_cds_XP_016510803.1_23605
CDS Infomation

[gene=LOC107828069] [db_xref=GeneID:107828069] [protein=probably inactive leucine-rich repeat receptor-like protein kinase IMK2] [protein_id=XP_016510803.1] [location=complement(join(38906..39528,39651..41538))] [gbkey=CDS]
Sequence

ATGGATAGGTGGAATACTTCACTGAGTAGATATTATAACTACCCTTTTCGATTCTGGCAT
TTTTATTCCATTATTGTTGTGATTGTATTTTCTTCCAATTTCTCTATTATATCAGCTGGG
AGGAGTTCAGATGGGGTTATTGTAACTCAAGCTGATTTTCAAGCACTTAAGGCCATTAAA
CATGAGCTGATTGATTTTAGAGGAATCTTGAAAAGTTGGAATGACAGTGGTTTAGGAGCT
TGTGGTGGTGGATGGATTGGTATAAAGTGTGTTAATGGGGAAGTTATAGCTATACAGTTG
CCTTGGAAAGGATTAGGTGGCAGAATTTCTGAAAAAATTGGTCAATTACAAGCTCTTAGA
AAGCTTAGTATTCATGACAATGTTATTGCTGGTCCTGTTCCAACTTCATTGAGTTTTCTT
CCAAATCTTAGAGGTGTTTATCTTTTCAATAACCGGCTTTCGGGTTCAATCCCACCAACA
ATTGGAAGATCACCACTTCTTCAGACTCTTGATCTTAGCAACAATCAACTCACTGGTACT
ATCCCTCCTAGTCTTGCGAATTCGACAAGGTTATACAGACTCAACTTGAGCTACAATGCA
CTTTCAGGTTCAATCCCAGTAAGTTTTACTCAATCCCCTTCTCTTACTTTTCTTGCACTT
GAACATAACAATCTTTCTGGCTCTATTCCTGATACTTGGGGTAATGTTGTTGTCAACAAT
AAGTCTTATCAACTTCAGTATCTTACCCTTGATCACAATCTTTTATATGGGAAAATTCCA
ACTTCAATTAGCAAGTTAAGTATGCTTGAGGAGATTAATCTTAGTCATAACCAAATTAAT
GGGACTATTCCTGATGAATTAGGGGCACTTACTAGGCTTGCTATTCTTGATTTATCTAAT
AATTCCATAAATGGAACTATTCCTGTTAGTTTCTCCAATCTTTCAGCTCTTGTTACTTTG
AATTTAAAAAGCAATCTTTTGGATAACCAAATCCCAGATGTTATATATAGATTGCAAAAT
CTTTCAGTGTTGGATTTGAGTGACAATAAGCTCACTGGTCATATTCCAGCCACTATTGGG
AATATTTCTAGGCTCAACTCACTTGATTTATCTGAAAACAACTTCACTGGTGAAATCCCA
AAGTCTCTTGTTTCGTTGGCGAATTTGACTAGTTTTGATGTCTCTTACAACAATCTTTCT
GGGGTTGTCCCATCTCTTCTTTCTAAGAAGTTCAATTCAAGTGCTTTTGTTGGAAATCTA
GAGCTATGTGGATATAGTCCCTCAACTCCATGTGCTTCACCACCTCCTCAAACTCTTCCT
TCTTCTCCTATTGGTGGGGTTGCCAAGCCTCGCCATCGCAAACTTAGTACTAAGGATATC
ATTCTCATAGCATCTGGAGCTCTTCTAGTTGTTCTACTTCTTTTGTGTTGCATGCTACTT
TGCTGCTTGATTAGGAAAAAAGCAAATTCGAAAGCAAAAAATGGTAGTAAAGCCAGTGGC
TTAGCTACCACAGGAAGAGGTGCAAAGCCAGTTCCAGCAGCAGCAGGTGCTGAGGTTGAA
TCAACTGGTGGAAAACTAGTCCATTTCGATGGACCATTCGTGTTCACAGCGGACGACTTG
TTATGTGCCACTGCAGAGATAATGGGAAAGAGCACTTATGGAACAGCATATAAGGCTACA
TTAGAGGATGGTAATCAAGTTGCTGTGAAGAGGCTGCGCGAGAAGATCACAAAAGGGCAA
AAAGAGTTTGAAGCTGAAGTTGCTGAATTAGGCAAGATTCGACACCCAAATATTTTGGCT
CTCAGAGCCTATTACTTGGGACCTAAAGGAGAAAAGCTTCTTGTCTATGATTATATGTCT
AATGGAAGTCTCTCGTCCTTCCTCCATGCTCGAGGTCCTGAGACAACAATAGACTGGCCT
ACAAGGATGAGGATTGCTATTGGTATAACAAAAGGCATATGCTTTTTGCATAGCAAAGAA
AACATAATACATGGGAATCTTACATCAAGCAATATACTTCTTGATGAGCAAAACAACCCA
ACGATTGCAGATGTAGGCCTCTCCAGGCTTATGACAAGTGCTGGTAACACCAATGTGATT
GCCACTGCAGGCACGTTAGGTTATCGTGCACCAGAGCTCTCGAAAATCAAGAATGCAAGC
ACCAAGACCGATGTCTATAGTGTTGGAGTGATCATTTTGGAGCTCTTGACTGGAAAATCA
CCAAGCGGGGCAACAGATGGACTCGATTTGCCACAGTGGGTAGCTTCCATTGTGAAAGAG
GAGTGGACTAATGAAGTGTTTGATGTTGAACTTATGAGGGATGCACCTAATATTGGTGAT
GAATTGCTTAATACTTTGAAACTAGCTTTGCATTGTGTTGATCCAACGCCAACAGCTCGG
CCTGAAGCTGAGCAAGTACTTCAGAAATTGGAGGAGATTAAACCAGAGATGATGTTAACA
GCCACCAGTTCTGGAGATGATGGCACAGCAGTTCAAGAAAAGAGTGAATAA

Peptide Sequence

PEP ID

XP_016510803.1
PEP Infomation

PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Nicotiana tabacum]
Sequence

MDRWNTSLSRYYNYPFRFWHFYSIIVVIVFSSNFSIISAGRSSDGVIVTQADFQALKAIK
HELIDFRGILKSWNDSGLGACGGGWIGIKCVNGEVIAIQLPWKGLGGRISEKIGQLQALR
KLSIHDNVIAGPVPTSLSFLPNLRGVYLFNNRLSGSIPPTIGRSPLLQTLDLSNNQLTGT
IPPSLANSTRLYRLNLSYNALSGSIPVSFTQSPSLTFLALEHNNLSGSIPDTWGNVVVNN
KSYQLQYLTLDHNLLYGKIPTSISKLSMLEEINLSHNQINGTIPDELGALTRLAILDLSN
NSINGTIPVSFSNLSALVTLNLKSNLLDNQIPDVIYRLQNLSVLDLSDNKLTGHIPATIG
NISRLNSLDLSENNFTGEIPKSLVSLANLTSFDVSYNNLSGVVPSLLSKKFNSSAFVGNL
ELCGYSPSTPCASPPPQTLPSSPIGGVAKPRHRKLSTKDIILIASGALLVVLLLLCCMLL
CCLIRKKANSKAKNGSKASGLATTGRGAKPVPAAAGAEVESTGGKLVHFDGPFVFTADDL
LCATAEIMGKSTYGTAYKATLEDGNQVAVKRLREKITKGQKEFEAEVAELGKIRHPNILA
LRAYYLGPKGEKLLVYDYMSNGSLSSFLHARGPETTIDWPTRMRIAIGITKGICFLHSKE
NIIHGNLTSSNILLDEQNNPTIADVGLSRLMTSAGNTNVIATAGTLGYRAPELSKIKNAS
TKTDVYSVGVIILELLTGKSPSGATDGLDLPQWVASIVKEEWTNEVFDVELMRDAPNIGD
ELLNTLKLALHCVDPTPTARPEAEQVLQKLEEIKPEMMLTATSSGDDGTAVQEKSE

Transcript Sequence

Gene sequence data has not been registered.